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Charlotte Matthews,

Publications of interest

  1. Sample storage conditions significantly influence faecal microbiome profiles. Jocelyn M Choo, Lex EX Leong, Geraint B Rogers. Scientific Reports 5:16350, DOI: 10.1038/srep16350. Report
  2. Fecal microbiota analysis: an overview of sample collection methods and sequencing strategies. Vincent Thomas, James Clark, Joël Doré.Future Microbiol. (2015) 10(9), 00–00. Review
  3. The Effects of Freezing on Faecal Microbiota as Determined Using MiSeq Sequencing and Culture-Based Investigations. Fiona Fouhy, Jennifer Deane Mary C. Rea, Órla O’Sullivan, R. Paul Ross, Grace O’Callaghan, Barry J. Plant, Catherine Stanton. PLoS ONE 10(3): e0119355. doi:10.1371/journal.pone.0119355. Article
  4. Comparison of methods for fecal microbiome biospecimen collection. Christine Dominianni, Jing Wu, Richard B Hayes, Jiyoung Ahn. Microbiology 2014, 14:103. Article
  5. Relating the metatranscriptome and metagenome of the human gut. Franzosa EA, Morgan XC, Segata N, Waldron L, Reyes J, Earl AM, Giannoukos G, Boylan MR, Ciulla D, Gevers D, Izard J, Garrett WS, Chan AT, Huttenhower C. . Proc Natl Acad Sci U S A. 2014 Jun 3;111(22):E2329-38. doi: 0.1073/pnas.1319284111. Epub 2014 May 19. PubMed PMID: 24843156; PubMed Central PMCID: PMC4050606. Article
  6. Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags. Wu GD, Lewis JD, Hoffmann C, Chen YY, Knight R, Bittinger K, Hwang J, Chen J, Berkowsky R, Nessel L, Li H, Bushman FD.  BMC Microbiol. 2010 Jul 30;10:206. doi: 10.1186/1471-2180-10-206. PubMed PMID: 20673359; PubMed Central PMCID: PMC2921404. Article